When WrapAndShip=Yes and a value is specified for ShipPath, by default DITA2Go copies deliverables to the ShipPath directory, leaving the originals in the WrapPath directory.
To have DITA2Go move deliverables instead of copying them:
[Automation] WrapAndShip=Yes ; MoveArchive = No (default, copy archive to ShipPath) or Yes (move ; archive to ShipPath instead of copying it) MoveArchive=Yes
When MoveArchive=Yes, deliverables are moved to the ShipPath directory and the originals are deleted from the WrapPath directory.
When MoveArchive=No, deliverables are copied to the ShipPath directory, and the originals remain in the WrapPath directory.
MoveArchive takes effect only when WrapAndShip=Yes (see §44.2 Activating and logging production of deliverables) and ShipPath has a non-blank value.